Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RHORhodopsin. (344 aa)    
Predicted Functional Partners:
ENSVPAP00000006360
annotation not available
   
 0.999
GRK6
G protein-coupled receptor kinase 6.
    
 0.996
GNAT2
G protein subunit alpha transducin 2.
   
 0.995
ARR3
Arrestin 3.
   
 0.991
GNAT3
G protein subunit alpha transducin 3.
   
 0.989
GRK7
G protein-coupled receptor kinase 7.
   
 0.978
PRPH2
Peripherin 2.
   
 
 0.975
GRK3
G protein-coupled receptor kinase 3.
    
 0.967
GNGT1
G protein subunit gamma transducin 1.
   
 0.965
GNAI1
G protein subunit alpha i1.
   
 0.963
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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