Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003095annotation not available (44 aa)    
Predicted Functional Partners:
ENSVPAP00000001883
annotation not available
      
 0.681
DCPS
Decapping enzyme, scavenger.
      
 0.659
PDCD5
Programmed cell death 5.
   
    0.648
LSM12
LSM12 homolog.
   
  
 0.633
MAK16
MAK16 homolog.
   
  
 0.625
DIMT1
DIMT1 rRNA methyltransferase and ribosome maturation factor.
   
  
 0.624
BYSL
Bystin like.
      
 0.613
SPATA5
Spermatogenesis associated 5.
      
 0.612
ENSVPAP00000003093
annotation not available
      
 0.586
ARPC2
Actin related protein 2/3 complex subunit 2.
      
 0.586
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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