Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003106annotation not available (69 aa)    
Predicted Functional Partners:
TNC
Tenascin C.
    
  0.635
TNN
Tenascin N.
    
  0.635
TNR
Tenascin R.
    
  0.635
ENSVPAP00000004113
annotation not available
 
     
0.514
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
    
 
 0.510
ENSVPAP00000003542
annotation not available
      
 0.498
LRIT1
Leucine rich repeat, Ig-like and transmembrane domains 1.
    
 0.452
LRIT3
Leucine rich repeat, Ig-like and transmembrane domains 3.
    
 0.452
ADGRL3
Adhesion G protein-coupled receptor L3.
    
 0.430
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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