Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003112annotation not available (649 aa)    
Predicted Functional Partners:
HDAC2
Histone deacetylase 2.
    
   0.869
FXR2
FMR1 autosomal homolog 2.
    
   0.774
ATRN
Attractin.
   
 
 0.774
ATRNL1
Attractin like 1.
   
 
 0.774
CHD1
Chromodomain helicase DNA binding protein 1.
    
   0.774
RAN
RAN, member RAS oncogene family.
    
   0.774
UNC45B
Unc-45 myosin chaperone B.
      
 0.739
ANKRD46
Ankyrin repeat domain 46.
    
   0.732
SAMD3
Sterile alpha motif domain containing 3.
      
 0.659
ENSVPAP00000002872
annotation not available
    
 
 0.638
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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