Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL33Mitochondrial ribosomal protein L33. (57 aa)    
Predicted Functional Partners:
MRPL13
Mitochondrial ribosomal protein L13.
  
 
 0.995
ENSVPAP00000002056
annotation not available
  
 
 0.995
ENSVPAP00000001701
annotation not available
  
 
 0.994
MRPL4
Mitochondrial ribosomal protein L4.
  
 
 0.994
MRPS9
Mitochondrial ribosomal protein S9.
  
 
 0.992
MRPL32
Mitochondrial ribosomal protein L32.
  
 
 0.991
MRPL17
Mitochondrial ribosomal protein L17.
  
 
 0.991
ENSVPAP00000008283
annotation not available
  
 
 0.991
MRPL9
Mitochondrial ribosomal protein L9.
  
 
 0.990
MRPS16
Mitochondrial ribosomal protein S16.
  
 
 0.990
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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