Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BABAM2BRISC and BRCA1 A complex member 2. (410 aa)    
Predicted Functional Partners:
BRCC3
BRCA1/BRCA2-containing complex subunit 3.
    
 0.999
ENSVPAP00000003155
annotation not available
    
 0.999
ABRAXAS2
Abraxas 2, BRISC complex subunit.
    
 0.999
ABRAXAS1
Abraxas 1, BRCA1 A complex subunit.
    
 0.999
UIMC1
Ubiquitin interaction motif containing 1.
    
 0.998
BRCA1
BRCA1 DNA repair associated.
    
 0.992
BARD1
BRCA1 associated RING domain 1.
   
 0.985
BRCA2
BRCA2 DNA repair associated.
    
 
 0.958
RAD51
RAD51 recombinase.
    
 
 0.932
ENSVPAP00000001885
annotation not available
    
  0.873
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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