Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSTF1Osteoclast stimulating factor 1. (198 aa)    
Predicted Functional Partners:
MYO1E
Myosin IE.
    
 0.928
CDC5L
Cell division cycle 5 like.
    
 
 0.683
CASP7
Caspase 7.
    
 0.674
VEGFC
Vascular endothelial growth factor C.
   
 
 0.645
SH3D19
SH3 domain containing 19.
    
 0.632
PDCD5
Programmed cell death 5.
    
 
 0.629
CCNC
Cyclin C.
      
 0.615
ENSVPAP00000011168
annotation not available
      
 0.606
ENSVPAP00000011283
annotation not available
      
 0.603
ACTR8
Actin related protein 8.
    
 0.591
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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