Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RIT1Ras like without CAAX 1. (181 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
    
 0.755
PPP1CB
Protein phosphatase 1 catalytic subunit beta.
    
 0.714
SHOC2
SHOC2 leucine rich repeat scaffold protein.
    
 0.708
PPP1CC
Protein phosphatase 1 catalytic subunit gamma.
    
 0.702
ADGRA3
Adhesion G protein-coupled receptor A3.
    
 0.697
CTNNAL1
Catenin alpha like 1.
    
 0.685
UCHL3
Ubiquitin C-terminal hydrolase L3.
   
 
 0.685
BRAF
B-Raf proto-oncogene, serine/threonine kinase.
   
 0.678
ARAF
A-Raf proto-oncogene, serine/threonine kinase.
   
 0.678
RAF1
Raf-1 proto-oncogene, serine/threonine kinase.
   
 0.678
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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