STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DSC3Desmocollin 3. (874 aa)    
Predicted Functional Partners:
ENSVPAP00000010021
annotation not available
   
 0.907
PKP2
Plakophilin 2.
   
 0.877
DSG1
Desmoglein 1.
   
 0.865
DSP
Desmoplakin.
   
 0.792
DSG3
Desmoglein 3.
   
 0.744
DSG2
Desmoglein 2.
   
 0.744
PERP
P53 apoptosis effector related to PMP22.
   
 
 0.725
MACF1
Microtubule actin crosslinking factor 1.
   
 0.708
DST
Dystonin.
   
 0.708
CTNNB1
Catenin beta 1.
   
 0.702
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.