Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GAREM1GRB2 associated regulator of MAPK1 subtype 1. (834 aa)    
Predicted Functional Partners:
GRB2
Growth factor receptor bound protein 2.
   
 
 0.968
ENSVPAP00000000205
annotation not available
   
   0.885
ENSVPAP00000002443
annotation not available
    
   0.863
ENSVPAP00000005756
annotation not available
    
 
 0.849
ENSVPAP00000005781
annotation not available
    
 0.831
EXOC4
Exocyst complex component 4.
    
 0.800
EHBP1
EH domain binding protein 1.
    
 0.796
EXOC5
Exocyst complex component 5.
   
 0.784
ENSVPAP00000001880
annotation not available
    
 0.773
RAB1A
RAB1A, member RAS oncogene family.
   
 0.766
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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