Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CATSPERBCation channel sperm associated auxiliary subunit beta. (1115 aa)    
Predicted Functional Partners:
CATSPER4
Cation channel sperm associated 4.
  
 
 0.983
ENSVPAP00000001474
annotation not available
    
 0.976
CATSPERE
Catsper channel auxiliary subunit epsilon.
  
 
 0.938
CATSPER2
Cation channel sperm associated 2.
    
 0.901
ENSVPAP00000005837
annotation not available
    
 0.901
BOLL
Boule homolog, RNA binding protein.
      
 0.690
SLCO4C1
Solute carrier organic anion transporter family member 4C1.
    
 
 0.668
SLCO6A1
Solute carrier organic anion transporter family member 6A1.
    
 
 0.668
ENSVPAP00000005095
annotation not available
      
 0.655
SYNJ2BP
Synaptojanin 2 binding protein.
    
 0.622
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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