Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HTR3B5-hydroxytryptamine receptor 3B. (442 aa)    
Predicted Functional Partners:
ENSVPAP00000000363
annotation not available
    
0.970
ENSVPAP00000003236
annotation not available
     
  0.944
ENSVPAP00000008853
annotation not available
      
 0.615
GABARAPL2
GABA type A receptor associated protein like 2.
      
 0.613
TAC3
Tachykinin precursor 3.
      
 0.595
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A.
      
 0.588
GNAQ
G protein subunit alpha q.
      
 0.587
JMJD6
Jumonji domain containing 6, arginine demethylase and lysine hydroxylase.
      
 0.587
ENSVPAP00000003922
annotation not available
   
  0.579
RIC3
RIC3 acetylcholine receptor chaperone.
    
 
 0.534
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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