Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TC2NTandem C2 domains, nuclear. (488 aa)    
Predicted Functional Partners:
TMEM200A
Transmembrane protein 200A.
      
 0.720
WDR48
WD repeat domain 48.
      
 0.717
ENSVPAP00000001474
annotation not available
    
 
 0.699
ENSVPAP00000002923
annotation not available
    
 0.672
ITSN2
Intersectin 2.
     
 0.669
OTUD3
OTU deubiquitinase 3.
      
 0.601
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.595
CATSPERB
Cation channel sperm associated auxiliary subunit beta.
   
  
 0.581
CATSPER2
Cation channel sperm associated 2.
    
 
 0.572
ENSVPAP00000005837
annotation not available
    
 
 0.572
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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