STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003241annotation not available (506 aa)    
Predicted Functional Partners:
DCP1A
Decapping mRNA 1A.
   
 0.999
EDC4
Enhancer of mRNA decapping 4.
   
 0.999
DDX6
DEAD-box helicase 6.
   
 0.999
DCP2
Decapping mRNA 2.
  
 0.999
ENSVPAP00000004485
annotation not available
   
 0.995
XRN1
5'-3' exoribonuclease 1.
   
 
 0.991
PATL1
PAT1 homolog 1, processing body mRNA decay factor.
    
 0.985
LSM14A
LSM14A mRNA processing body assembly factor.
    
 
 0.967
ANXA10
Annexin A10.
    
   0.965
ENSVPAP00000011510
annotation not available
    
   0.965
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.