Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIP11Thyroid hormone receptor interactor 11. (1952 aa)    
Predicted Functional Partners:
ENSVPAP00000000014
annotation not available
   
 0.919
GOLGB1
Golgin B1.
   
 
 0.856
ARNT
Aryl hydrocarbon receptor nuclear translocator.
    
 
 0.814
RAB11A
RAB11A, member RAS oncogene family.
   
 0.668
ENSVPAP00000009125
annotation not available
   
 0.627
USO1
USO1 vesicle transport factor.
   
 0.624
CKAP5
Cytoskeleton associated protein 5.
   
 0.615
ENSVPAP00000000812
annotation not available
   
 0.612
RANBP2
RAN binding protein 2.
   
 0.600
PLK2
Polo like kinase 2.
   
 0.591
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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