Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CPSF2Cleavage and polyadenylation specific factor 2. (781 aa)    
Predicted Functional Partners:
ENSVPAP00000000146
annotation not available
   
 0.999
SYMPK
Symplekin.
   
 0.999
CPSF3
Cleavage and polyadenylation specific factor 3.
   
0.999
ENSVPAP00000010773
annotation not available
    
 0.999
ENSVPAP00000010822
annotation not available
   
 0.999
ENSVPAP00000001402
annotation not available
    
 0.998
PCF11
PCF11 cleavage and polyadenylation factor subunit.
   
 0.997
CSTF1
Cleavage stimulation factor subunit 1.
   
 0.997
WDR82
WD repeat domain 82.
    
 0.994
PPP1CB
Protein phosphatase 1 catalytic subunit beta.
   
 0.994
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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