Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003253annotation not available (380 aa)    
Predicted Functional Partners:
ENSVPAP00000002082
annotation not available
    
 
 0.997
PDCD10
Programmed cell death 10.
    
 
 0.992
MAP3K3
Mitogen-activated protein kinase kinase kinase 3.
    
 0.990
MAP3K2
Mitogen-activated protein kinase kinase kinase 2.
    
 0.917
TLN2
Talin 2.
    
 0.905
ENSVPAP00000003920
annotation not available
    
 0.896
LPXN
Leupaxin.
    
 
 0.754
MTMR9
Myotubularin related protein 9.
   
 
 0.730
ENSVPAP00000006902
annotation not available
   
 0.729
GARS1
glycyl-tRNA synthetase 1.
    
 
 0.714
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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