Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003278annotation not available (1353 aa)    
Predicted Functional Partners:
ENSVPAP00000003275
annotation not available
 
     0.927
NUDCD1
NudC domain containing 1.
    
   0.834
LRIF1
Ligand dependent nuclear receptor interacting factor 1.
    
 
 0.812
PDS5A
PDS5 cohesin associated factor A.
   
  
 0.705
METTL4
Methyltransferase like 4.
   
  
 0.694
SCAF11
SR-related CTD associated factor 11.
   
    0.668
PHIP
Pleckstrin homology domain interacting protein.
   
    0.650
AHCTF1
AT-hook containing transcription factor 1.
   
    0.650
DMXL1
Dmx like 1.
   
    0.650
MACROH2A1
macroH2A.1 histone.
    
 
 0.632
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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