Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003285annotation not available (189 aa)    
Predicted Functional Partners:
GOT2
Glutamic-oxaloacetic transaminase 2.
   
 0.999
ATP5F1A
ATP synthase F1 subunit alpha.
  
 0.998
ENSVPAP00000002417
annotation not available
  
 0.998
CS
Citrate synthase.
  
 0.998
ATP5F1B
ATP synthase F1 subunit beta.
  
 0.996
FH
Fumarate hydratase.
  
 0.989
SUCLG1
succinate-CoA ligase alpha subunit.
  
 0.988
IDH3A
Isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha.
  
 0.981
ENSVPAP00000000865
annotation not available
  
 0.978
ATP5PB
ATP synthase peripheral stalk-membrane subunit b.
   
 
 0.976
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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