Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNRNP48Small nuclear ribonucleoprotein U11/U12 subunit 48. (287 aa)    
Predicted Functional Partners:
ENSVPAP00000005534
annotation not available
   
 0.998
ENSVPAP00000003185
annotation not available
    
 0.997
ENSVPAP00000008415
annotation not available
    
 0.996
ZRSR2
Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2.
    
 0.993
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
    
 0.993
ZCRB1
Zinc finger CCHC-type and RNA binding motif containing 1.
    
 0.987
ENSVPAP00000010392
annotation not available
    
 0.985
ENSVPAP00000006933
annotation not available
    
 0.976
CWC22
CWC22 spliceosome associated protein homolog.
    
 0.973
SYF2
SYF2 pre-mRNA splicing factor.
    
 0.971
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.