Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CNTN5Contactin 5. (1084 aa)    
Predicted Functional Partners:
PTPRG
Protein tyrosine phosphatase receptor type G.
    
 
 0.904
CHL1
Cell adhesion molecule L1 like.
   
 0.790
NRCAM
Neuronal cell adhesion molecule.
   
 0.790
CNTNAP5
Contactin associated protein like 5.
   
 0.708
CNTNAP2
Contactin associated protein like 2.
   
 0.708
ENSVPAP00000003450
annotation not available
   
 0.708
ENSVPAP00000009371
annotation not available
   
 0.708
ANK2
Ankyrin 2.
   
 0.658
ANKDD1B
Ankyrin repeat and death domain containing 1B.
   
 0.658
ENSVPAP00000011699
annotation not available
   
 0.658
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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