Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BLMHBleomycin hydrolase. (450 aa)    
Predicted Functional Partners:
NUDT12
Nudix hydrolase 12.
    
 
 0.969
KERA
Keratocan.
    
   0.964
SPATA4
Spermatogenesis associated 4.
      
 0.690
ENSVPAP00000009076
annotation not available
      
 0.688
NPEPPS
Aminopeptidase puromycin sensitive.
    
 0.681
SH3BGRL
SH3 domain binding glutamate rich protein like.
      
 0.677
NUDT13
Nudix hydrolase 13.
    
 
 0.677
PALB2
Partner and localizer of BRCA2.
      
 0.665
ENSVPAP00000010297
annotation not available
   
   0.645
TPP2
Tripeptidyl peptidase 2.
     
 0.640
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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