Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMIGD1Transmembrane and immunoglobulin domain containing 1. (288 aa)    
Predicted Functional Partners:
ENSVPAP00000002465
annotation not available
      
 0.676
ENSVPAP00000001648
annotation not available
   
  
 0.650
ENSVPAP00000008721
annotation not available
      
 0.621
SLC10A6
Solute carrier family 10 member 6.
   
  
 0.568
SLC10A2
Solute carrier family 10 member 2.
   
  
 0.568
MTURN
Maturin, neural progenitor differentiation regulator homolog.
      
 0.544
PKHD1
PKHD1 ciliary IPT domain containing fibrocystin/polyductin.
      
 0.521
LRP2
LDL receptor related protein 2.
      
 0.501
MYBPHL
Myosin binding protein H like.
      
 0.493
ENSVPAP00000008051
annotation not available
   
  
 0.491
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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