Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003329annotation not available (420 aa)    
Predicted Functional Partners:
GYS2
Glycogen synthase 2.
   
 0.992
GBE1
1,4-alpha-glucan branching enzyme 1.
   
 0.985
GYG1
Glycogenin 1.
    
  0.985
PPP1R3C
Protein phosphatase 1 regulatory subunit 3C.
   
 0.983
AGL
Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase.
   
 0.978
ENSVPAP00000000316
annotation not available
   
 0.972
PNPLA4
Patatin like phospholipase domain containing 4.
      
 0.904
PYGL
Glycogen phosphorylase L.
   
 0.891
OSCP1
Organic solute carrier partner 1.
    
   0.853
PCNA
Proliferating cell nuclear antigen.
   
 0.798
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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