TBC1D19 protein (Vicugna pacos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

TBC1D19

TBC1 domain family member 19. (524 aa)

Predicted Functional Partners:

ENSVPAP00000002033

0.967

ENSVPAP00000011011

0.967

LRRC49

0.966

ENSVPAP00000003017

0.965

TBC1D14

0.891

ENSVPAP00000006191

0.756

ENSVPAP00000003700

0.727

TBC1D22B

0.725

ENSVPAP00000009673

0.723

ENSVPAP00000007476

0.721

Your Current Organism:

Vicugna pacos

NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSVPAP00000002033	ENSVPAP00000003017	ENSVPAP00000002033	ENSVPAP00000003017	annotation not available	annotation not available	0.988
ENSVPAP00000002033	ENSVPAP00000011011	ENSVPAP00000002033	ENSVPAP00000011011	annotation not available	annotation not available	0.980
ENSVPAP00000002033	LRRC49	ENSVPAP00000002033	ENSVPAP00000010728	annotation not available	Leucine rich repeat containing 49.	0.990
ENSVPAP00000002033	TBC1D19	ENSVPAP00000002033	ENSVPAP00000003359	annotation not available	TBC1 domain family member 19.	0.967
ENSVPAP00000003017	ENSVPAP00000002033	ENSVPAP00000003017	ENSVPAP00000002033	annotation not available	annotation not available	0.988
ENSVPAP00000003017	ENSVPAP00000011011	ENSVPAP00000003017	ENSVPAP00000011011	annotation not available	annotation not available	0.965
ENSVPAP00000003017	LRRC49	ENSVPAP00000003017	ENSVPAP00000010728	annotation not available	Leucine rich repeat containing 49.	0.988
ENSVPAP00000003017	TBC1D19	ENSVPAP00000003017	ENSVPAP00000003359	annotation not available	TBC1 domain family member 19.	0.965
ENSVPAP00000003700	ENSVPAP00000006191	ENSVPAP00000003700	ENSVPAP00000006191	annotation not available	annotation not available	0.769
ENSVPAP00000003700	ENSVPAP00000007476	ENSVPAP00000003700	ENSVPAP00000007476	annotation not available	annotation not available	0.500
ENSVPAP00000003700	ENSVPAP00000009673	ENSVPAP00000003700	ENSVPAP00000009673	annotation not available	annotation not available	0.403
ENSVPAP00000003700	TBC1D14	ENSVPAP00000003700	ENSVPAP00000007387	annotation not available	TBC1 domain family member 14.	0.496
ENSVPAP00000003700	TBC1D19	ENSVPAP00000003700	ENSVPAP00000003359	annotation not available	TBC1 domain family member 19.	0.727
ENSVPAP00000003700	TBC1D22B	ENSVPAP00000003700	ENSVPAP00000003131	annotation not available	TBC1 domain family member 22B.	0.786
ENSVPAP00000006191	ENSVPAP00000003700	ENSVPAP00000006191	ENSVPAP00000003700	annotation not available	annotation not available	0.769
ENSVPAP00000006191	ENSVPAP00000009673	ENSVPAP00000006191	ENSVPAP00000009673	annotation not available	annotation not available	0.765
ENSVPAP00000006191	TBC1D14	ENSVPAP00000006191	ENSVPAP00000007387	annotation not available	TBC1 domain family member 14.	0.732
ENSVPAP00000006191	TBC1D19	ENSVPAP00000006191	ENSVPAP00000003359	annotation not available	TBC1 domain family member 19.	0.756
ENSVPAP00000007476	ENSVPAP00000003700	ENSVPAP00000007476	ENSVPAP00000003700	annotation not available	annotation not available	0.500
ENSVPAP00000007476	TBC1D14	ENSVPAP00000007476	ENSVPAP00000007387	annotation not available	TBC1 domain family member 14.	0.769