Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPPAcid phosphatase, prostate. (416 aa)    
Predicted Functional Partners:
SLPI
Secretory leukocyte peptidase inhibitor.
    
 
 0.905
ENSVPAP00000000529
annotation not available
    
 
 0.848
ENSVPAP00000000575
annotation not available
      
 0.769
SSTR2
Somatostatin receptor 2.
      
 0.769
PLK4
Polo like kinase 4.
    
 0.765
ENSVPAP00000003969
annotation not available
      
 0.764
AKAP4
A-kinase anchoring protein 4.
      
 0.754
GLG1
Golgi glycoprotein 1.
      
 0.691
TTR
Transthyretin.
      
 0.690
ENSVPAP00000002538
annotation not available
      
 0.688
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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