Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACKR4Atypical chemokine receptor 4. (350 aa)    
Predicted Functional Partners:
ENSVPAP00000004209
annotation not available
    
 
 0.771
CCL27
C-C motif chemokine ligand 27.
     
 0.706
ENSVPAP00000007382
annotation not available
   
  
 0.681
CXCL13
C-X-C motif chemokine ligand 13.
    
 0.623
ENSVPAP00000008478
annotation not available
      
 0.617
ENSVPAP00000007056
annotation not available
    
 0.607
CCL8
C-C motif chemokine ligand 8.
   
 0.604
ENSVPAP00000004909
annotation not available
      
 0.600
DHODH
Dihydroorotate dehydrogenase (quinone).
      
 0.599
ENSVPAP00000002965
annotation not available
    
 0.535
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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