Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003396annotation not available (357 aa)    
Predicted Functional Partners:
ENSVPAP00000004371
annotation not available
  
 0.965
CCDC65
Coiled-coil domain containing 65.
    
 
 0.958
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
  
 0.953
ARMC3
Armadillo repeat containing 3.
   
 
 0.950
DNAI2
Dynein axonemal intermediate chain 2.
   
 
 0.949
ALS2
Alsin Rho guanine nucleotide exchange factor ALS2.
   
 
 0.944
DYNLRB2
Dynein light chain roadblock-type 2.
   
 
 0.941
TRIM23
Tripartite motif containing 23.
  
 0.939
ENSVPAP00000010321
annotation not available
   
 
 0.939
ARMC4
Armadillo repeat containing 4.
   
 
 0.938
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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