Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLEC5AC-type lectin domain containing 5A. (185 aa)    
Predicted Functional Partners:
CLEC4D
C-type lectin domain family 4 member D.
   
 
 0.752
ENSVPAP00000002482
annotation not available
    
 0.728
LRRC49
Leucine rich repeat containing 49.
    
 
 0.662
TNC
Tenascin C.
    
  0.635
TNN
Tenascin N.
    
  0.635
TNR
Tenascin R.
    
  0.635
ENSVPAP00000000194
annotation not available
      
 0.615
ZAP70
Zeta chain of T cell receptor associated protein kinase 70.
    
 0.546
TTC21B
Tetratricopeptide repeat domain 21B.
    
 
 0.540
CLEC9A
C-type lectin domain containing 9A.
      
 0.512
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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