Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003427annotation not available (50 aa)    
Predicted Functional Partners:
ENSVPAP00000003396
annotation not available
   
 0.561
C5
Complement C5.
    
 0.551
FAM3C
Family with sequence similarity 3 member C.
     
 0.520
KNG1
Kininogen 1.
  
  0.513
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.512
ENSVPAP00000004663
annotation not available
  
 
 0.508
ENSVPAP00000009434
annotation not available
      
 0.506
LCA5L
Lebercilin LCA5 like.
    
 
 0.482
DNAJC10
DnaJ heat shock protein family (Hsp40) member C10.
   
  0.468
LRIT1
Leucine rich repeat, Ig-like and transmembrane domains 1.
    
 0.438
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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