Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003433annotation not available (372 aa)    
Predicted Functional Partners:
GTF2H3
General transcription factor IIH subunit 3.
   
 0.999
GTF2H1
General transcription factor IIH subunit 1.
    
 0.999
GTF2H5
General transcription factor IIH subunit 5.
    
 0.998
ENSVPAP00000006318
annotation not available
  
 0.998
MNAT1
MNAT1 component of CDK activating kinase.
    
 0.996
CCNH
Cyclin H.
   
 0.994
CDK7
Cyclin dependent kinase 7.
    
 0.989
GTF2E1
General transcription factor IIE subunit 1.
   
 0.986
XPA
XPA, DNA damage recognition and repair factor.
    
 0.986
GTF2E2
General transcription factor IIE subunit 2.
    
 0.986
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.