Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003450annotation not available (1277 aa)    
Predicted Functional Partners:
CNTN1
Contactin 1.
   
 0.810
CNTN4
Contactin 4.
   
 0.748
CNTN3
Contactin 3.
   
 0.709
CNTN5
Contactin 5.
   
 0.708
CNTN6
Contactin 6.
   
 0.708
CHL1
Cell adhesion molecule L1 like.
   
 0.698
NRCAM
Neuronal cell adhesion molecule.
   
 0.698
FAM49B
Family with sequence similarity 49 member B.
      
 0.615
BPIFA3
BPI fold containing family A member 3.
      
 0.611
VAT1L
Vesicle amine transport 1 like.
      
 0.609
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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