Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
NUCKS1Nuclear casein kinase and cyclin dependent kinase substrate 1. (305 aa)    
Predicted Functional Partners:
RAB29
RAB29, member RAS oncogene family.
 
    
 0.794
PM20D1
Peptidase M20 domain containing 1.
      
 0.745
HUWE1
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1.
    
   0.705
POC5
POC5 centriolar protein.
      
 0.665
CPA3
Carboxypeptidase A3.
   
  
 0.624
WDHD1
WD repeat and HMG-box DNA binding protein 1.
      
 0.621
DDRGK1
DDRGK domain containing 1.
      
 0.613
CDH7
Cadherin 7.
   
  
 0.610
BNC2
Basonuclin 2.
      
 0.601
TPH1
Tryptophan hydroxylase 1.
      
 0.601
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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