Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM39ATransmembrane protein 39A. (487 aa)    
Predicted Functional Partners:
DNAJC18
DnaJ heat shock protein family (Hsp40) member C18.
      
 0.555
LETM2
Leucine zipper and EF-hand containing transmembrane protein 2.
      
 0.543
SEC63
SEC63 homolog, protein translocation regulator.
      
 0.525
TMEM116
Transmembrane protein 116.
      
 0.514
PLA2R1
Phospholipase A2 receptor 1.
      
 0.498
TMEM45B
Transmembrane protein 45B.
      
 0.450
TMEM207
Transmembrane protein 207.
      
 0.450
ENSVPAP00000007679
annotation not available
      
 0.439
DERL1
Derlin 1.
      
 0.407
PCCA
propionyl-CoA carboxylase subunit alpha.
      
 0.402
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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