STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLA1APhospholipase A1 member A. (435 aa)    
Predicted Functional Partners:
PRKAG1
Protein kinase AMP-activated non-catalytic subunit gamma 1.
   
 0.786
ENSVPAP00000009559
annotation not available
    
 0.775
ENSVPAP00000003498
annotation not available
    
 0.755
ENSVPAP00000003396
annotation not available
   
 0.684
ENSVPAP00000009410
annotation not available
    
 
 0.682
ABT1
Activator of basal transcription 1.
      
 0.594
PRKAG2
Protein kinase AMP-activated non-catalytic subunit gamma 2.
   
 0.567
POU2F1
POU class 2 homeobox 1.
    
 0.543
CDS1
CDP-diacylglycerol synthase 1.
      
 0.539
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.530
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.