POPDC2 protein (Vicugna pacos) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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[Homology]

Score

POPDC2

Popeye domain containing 2. (361 aa)

Predicted Functional Partners:

TMEM70

0.750

RHBDD1

0.743

ENSVPAP00000010225

0.726

ENSVPAP00000001450

0.687

TMEM38A

0.561

CBR4

0.520

TMEM38B

0.518

ARHGAP31

0.517

CKAP4

0.510

ENSVPAP00000001371

0.509

Your Current Organism:

Vicugna pacos

NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca

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structured XML interaction data, according to the 'PSI-MI' data standard

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... functional annotations:

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARHGAP31	POPDC2	ENSVPAP00000003489	ENSVPAP00000003496	Rho GTPase activating protein 31.	Popeye domain containing 2.	0.517
ARHGAP31	TMEM70	ENSVPAP00000003489	ENSVPAP00000010435	Rho GTPase activating protein 31.	Transmembrane protein 70.	0.403
CBR4	POPDC2	ENSVPAP00000000306	ENSVPAP00000003496	Carbonyl reductase 4.	Popeye domain containing 2.	0.520
CBR4	RHBDD1	ENSVPAP00000000306	ENSVPAP00000002127	Carbonyl reductase 4.	Rhomboid domain containing 1.	0.446
CKAP4	ENSVPAP00000001450	ENSVPAP00000009747	ENSVPAP00000001450	Cytoskeleton associated protein 4.	annotation not available	0.741
CKAP4	ENSVPAP00000010225	ENSVPAP00000009747	ENSVPAP00000010225	Cytoskeleton associated protein 4.	annotation not available	0.615
CKAP4	POPDC2	ENSVPAP00000009747	ENSVPAP00000003496	Cytoskeleton associated protein 4.	Popeye domain containing 2.	0.510
CKAP4	RHBDD1	ENSVPAP00000009747	ENSVPAP00000002127	Cytoskeleton associated protein 4.	Rhomboid domain containing 1.	0.617
CKAP4	TMEM38A	ENSVPAP00000009747	ENSVPAP00000006222	Cytoskeleton associated protein 4.	Transmembrane protein 38A.	0.401
CKAP4	TMEM70	ENSVPAP00000009747	ENSVPAP00000010435	Cytoskeleton associated protein 4.	Transmembrane protein 70.	0.482
ENSVPAP00000001371	ENSVPAP00000010225	ENSVPAP00000001371	ENSVPAP00000010225	annotation not available	annotation not available	0.523
ENSVPAP00000001371	POPDC2	ENSVPAP00000001371	ENSVPAP00000003496	annotation not available	Popeye domain containing 2.	0.509
ENSVPAP00000001371	RHBDD1	ENSVPAP00000001371	ENSVPAP00000002127	annotation not available	Rhomboid domain containing 1.	0.583
ENSVPAP00000001371	TMEM38A	ENSVPAP00000001371	ENSVPAP00000006222	annotation not available	Transmembrane protein 38A.	0.488
ENSVPAP00000001450	CKAP4	ENSVPAP00000001450	ENSVPAP00000009747	annotation not available	Cytoskeleton associated protein 4.	0.741
ENSVPAP00000001450	ENSVPAP00000010225	ENSVPAP00000001450	ENSVPAP00000010225	annotation not available	annotation not available	0.732
ENSVPAP00000001450	POPDC2	ENSVPAP00000001450	ENSVPAP00000003496	annotation not available	Popeye domain containing 2.	0.687
ENSVPAP00000001450	RHBDD1	ENSVPAP00000001450	ENSVPAP00000002127	annotation not available	Rhomboid domain containing 1.	0.747
ENSVPAP00000001450	TMEM38A	ENSVPAP00000001450	ENSVPAP00000006222	annotation not available	Transmembrane protein 38A.	0.624
ENSVPAP00000001450	TMEM70	ENSVPAP00000001450	ENSVPAP00000010435	annotation not available	Transmembrane protein 70.	0.749