Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IQCB1IQ motif containing B1. (598 aa)    
Predicted Functional Partners:
CEP290
Centrosomal protein 290.
   
 0.996
EXOC1
Exocyst complex component 1.
   
 0.869
RAB11A
RAB11A, member RAS oncogene family.
   
 0.850
HAUS8
HAUS augmin like complex subunit 8.
     
 0.839
USP9X
Ubiquitin specific peptidase 9 X-linked.
    
 
 0.826
SDCCAG8
Serologically defined colon cancer antigen 8.
    
 0.808
CALM1
Calmodulin 2.
    
 0.796
CALM2
Calmodulin 2.
    
 0.796
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 
 0.779
ENSVPAP00000001031
annotation not available
    
 
 0.777
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.