Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003521annotation not available (189 aa)    
Predicted Functional Partners:
CASP3
Caspase 3.
    
 
 0.742
ACTB
Actin beta.
    
 0.698
CD63
CD63 molecule.
   
 
 0.695
CASP8
Caspase 8.
   
 
 0.616
HABP2
Hyaluronan binding protein 2.
    
 0.611
CD9
CD9 molecule.
   
 
 0.598
ENSVPAP00000004465
annotation not available
    
 0.593
ENSVPAP00000000399
annotation not available
    
 0.557
ENSVPAP00000007630
annotation not available
    
 
 0.548
SOD1
Superoxide dismutase 1.
   
 0.542
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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