Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003522annotation not available (364 aa)    
Predicted Functional Partners:
CTPS2
CTP synthase 2.
   
   0.966
TIGD3
Tigger transposable element derived 3.
    
   0.965
GMPS
Guanine monophosphate synthase.
  
 
 0.952
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
  
 0.901
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
  
  
 0.870
LGSN
Lengsin, lens protein with glutamine synthetase domain.
  
 0.825
POLR1B
RNA polymerase I subunit B.
   
 
 0.814
ENSVPAP00000003396
annotation not available
  
 
 0.799
RARS2
arginyl-tRNA synthetase 2, mitochondrial.
  
 
 0.778
RARS1
arginyl-tRNA synthetase 1.
  
 
 0.778
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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