ENSVPAP00000003535 protein (Vicugna pacos) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

ENSVPAP00000003535

annotation not available (235 aa)

Predicted Functional Partners:

ENSVPAP00000009188

0.999

KIF2A

0.907

ENSVPAP00000007298

0.870

C1D

0.798

ENSVPAP00000004102

0.786

KIF2C

0.779

AGO4

0.756

AGO1

0.756

AGO3

0.756

TAFA2

0.707

Your Current Organism:

Vicugna pacos

NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGO1	ENSVPAP00000003535	ENSVPAP00000006189	ENSVPAP00000003535	Argonaute RISC component 1.	annotation not available	0.756
AGO1	ENSVPAP00000009188	ENSVPAP00000006189	ENSVPAP00000009188	Argonaute RISC component 1.	annotation not available	0.707
AGO3	ENSVPAP00000003535	ENSVPAP00000007095	ENSVPAP00000003535	Argonaute RISC catalytic component 3.	annotation not available	0.756
AGO3	ENSVPAP00000009188	ENSVPAP00000007095	ENSVPAP00000009188	Argonaute RISC catalytic component 3.	annotation not available	0.707
AGO4	ENSVPAP00000003535	ENSVPAP00000006188	ENSVPAP00000003535	Argonaute RISC component 4.	annotation not available	0.756
AGO4	ENSVPAP00000009188	ENSVPAP00000006188	ENSVPAP00000009188	Argonaute RISC component 4.	annotation not available	0.707
C1D	ENSVPAP00000003535	ENSVPAP00000011238	ENSVPAP00000003535	C1D nuclear receptor corepressor.	annotation not available	0.798
C1D	ENSVPAP00000009188	ENSVPAP00000011238	ENSVPAP00000009188	C1D nuclear receptor corepressor.	annotation not available	0.747
ENSVPAP00000003535	AGO1	ENSVPAP00000003535	ENSVPAP00000006189	annotation not available	Argonaute RISC component 1.	0.756
ENSVPAP00000003535	AGO3	ENSVPAP00000003535	ENSVPAP00000007095	annotation not available	Argonaute RISC catalytic component 3.	0.756
ENSVPAP00000003535	AGO4	ENSVPAP00000003535	ENSVPAP00000006188	annotation not available	Argonaute RISC component 4.	0.756
ENSVPAP00000003535	C1D	ENSVPAP00000003535	ENSVPAP00000011238	annotation not available	C1D nuclear receptor corepressor.	0.798
ENSVPAP00000003535	ENSVPAP00000004102	ENSVPAP00000003535	ENSVPAP00000004102	annotation not available	annotation not available	0.786
ENSVPAP00000003535	ENSVPAP00000007298	ENSVPAP00000003535	ENSVPAP00000007298	annotation not available	annotation not available	0.870
ENSVPAP00000003535	ENSVPAP00000009188	ENSVPAP00000003535	ENSVPAP00000009188	annotation not available	annotation not available	0.999
ENSVPAP00000003535	KIF2A	ENSVPAP00000003535	ENSVPAP00000008246	annotation not available	Kinesin family member 2A.	0.907
ENSVPAP00000003535	KIF2C	ENSVPAP00000003535	ENSVPAP00000002349	annotation not available	Kinesin family member 2C.	0.779
ENSVPAP00000003535	TAFA2	ENSVPAP00000003535	ENSVPAP00000011462	annotation not available	TAFA chemokine like family member 2.	0.707
ENSVPAP00000004102	ENSVPAP00000003535	ENSVPAP00000004102	ENSVPAP00000003535	annotation not available	annotation not available	0.786
ENSVPAP00000007298	ENSVPAP00000003535	ENSVPAP00000007298	ENSVPAP00000003535	annotation not available	annotation not available	0.870