Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003559annotation not available (323 aa)    
Predicted Functional Partners:
ENSVPAP00000010337
annotation not available
    
   0.964
SH2D3C
SH2 domain containing 3C.
 
    
 0.932
NEDD9
Neural precursor cell expressed, developmentally down-regulated 9.
    
 0.920
NUP93
Nucleoporin 93.
    
 0.717
PPP1CC
Protein phosphatase 1 catalytic subunit gamma.
   
 0.664
CASS4
Cas scaffold protein family member 4.
    
 0.661
KPNA1
Karyopherin subunit alpha 1.
    
 
 0.653
RAN
RAN, member RAS oncogene family.
    
 
 0.635
ENSVPAP00000001118
annotation not available
    
 
 0.622
SEH1L
SEH1 like nucleoporin.
    
 0.622
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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