Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
P4HA2Prolyl 4-hydroxylase subunit alpha 2. (511 aa)    
Predicted Functional Partners:
ENSVPAP00000010773
annotation not available
    
 
 0.964
PDIA3
Protein disulfide isomerase family A member 3.
   
 0.856
ENSVPAP00000010444
annotation not available
   
 0.856
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
   
   0.853
CPSF2
Cleavage and polyadenylation specific factor 2.
    
   0.843
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
  
 0.756
P3H2
Prolyl 3-hydroxylase 2.
   
  
 0.723
ENSVPAP00000010545
annotation not available
   
  
 0.718
ENSVPAP00000001668
annotation not available
   
  
 0.694
ENSVPAP00000003994
annotation not available
   
  
 0.691
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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