Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003568annotation not available (1268 aa)    
Predicted Functional Partners:
NBN
Nibrin.
   
 0.999
MRE11
MRE11 homolog, double strand break repair nuclease.
  
 0.999
RBBP8
RB binding protein 8, endonuclease.
    
 0.999
RAD51
RAD51 recombinase.
   
 0.998
WRN
WRN RecQ like helicase.
  
 0.996
BRCA1
BRCA1 DNA repair associated.
    
 0.992
ATM
ATM serine/threonine kinase.
   
 0.991
BARD1
BRCA1 associated RING domain 1.
    
 0.990
EXO1
Exonuclease 1.
  
 0.989
XRCC6
X-ray repair cross complementing 6.
   
 0.987
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.