Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPUSD2RNA pseudouridine synthase domain containing 2. (541 aa)    
Predicted Functional Partners:
PUS7
Pseudouridine synthase 7.
  
 
 0.846
ENSVPAP00000008721
annotation not available
  
 
 0.843
PUS7L
Pseudouridine synthase 7 like.
   
 
 0.839
ENSVPAP00000003015
annotation not available
  
 0.829
ENSVPAP00000002466
annotation not available
    
   0.828
MRPL3
Mitochondrial ribosomal protein L3.
  
 
 0.813
TRUB2
TruB pseudouridine synthase family member 2.
  
 0.809
MRPL13
Mitochondrial ribosomal protein L13.
  
 
 0.803
ENSVPAP00000003603
annotation not available
  
 
 0.780
CUL3
Cullin 3.
    
   0.773
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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