Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMLNLeishmanolysin like peptidase. (657 aa)    
Predicted Functional Partners:
C9orf72
C9orf72-SMCR8 complex subunit.
    
 
 0.927
ENSVPAP00000004727
annotation not available
    
 
 0.692
GPR65
G protein-coupled receptor 65.
      
 0.687
ENSVPAP00000002312
annotation not available
    
 
 0.685
PIK3CB
Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta.
      
 0.685
ELF2
E74 like ETS transcription factor 2.
      
 0.659
ENSVPAP00000011725
annotation not available
    
 
 0.627
ABHD2
Abhydrolase domain containing 2.
   
  
 0.615
ENSVPAP00000004728
annotation not available
    
 
 0.607
DDIT4
DNA damage inducible transcript 4.
      
 0.604
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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