Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003607annotation not available (120 aa)    
Predicted Functional Partners:
REEP1
Receptor accessory protein 1.
     
 0.907
CNGA2
Cyclic nucleotide gated channel subunit alpha 2.
   
  
 0.776
CHCHD1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
      
 0.733
ADAD1
Adenosine deaminase domain containing 1.
      
 0.689
RPAP2
RNA polymerase II associated protein 2.
      
 0.665
RTP1
Receptor transporter protein 1.
   
 
  0.643
RIC8B
RIC8 guanine nucleotide exchange factor B.
      
 0.626
ODR4
Odr-4 GPCR localization factor homolog.
      
 0.605
ENSVPAP00000000176
annotation not available
   
  
 0.601
GPN3
GPN-loop GTPase 3.
      
 0.599
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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