Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NRXN1Neurexin 1. (1472 aa)    
Predicted Functional Partners:
NLGN2
Neuroligin 2.
   
 0.993
NLGN1
Neuroligin 1.
   
 0.985
ENSVPAP00000011222
annotation not available
   
 0.985
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.963
LRRTM2
Leucine rich repeat transmembrane neuronal 2.
    
 0.867
NXPH2
Neurexophilin 2.
   
 
 0.864
LRRTM4
Leucine rich repeat transmembrane neuronal 4.
   
 0.825
MPP6
Membrane palmitoylated protein 6.
    
 0.798
BCHE
Butyrylcholinesterase.
   
 0.780
LRRTM3
Leucine rich repeat transmembrane neuronal 3.
   
 0.761
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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