Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC113Coiled-coil domain containing 113. (343 aa)    
Predicted Functional Partners:
ENSVPAP00000009905
annotation not available
    
 
 0.947
ARMC4
Armadillo repeat containing 4.
   
 
 0.943
ENSVPAP00000011106
annotation not available
    
 
 0.942
ENSVPAP00000003126
annotation not available
   
 
 0.938
ENSVPAP00000009556
annotation not available
   
 
 0.933
WDR78
WD repeat domain 78.
   
 
 0.932
CFAP20
Cilia and flagella associated protein 20.
    
 
 0.929
ENSVPAP00000007186
annotation not available
    
 
 0.929
CFAP43
Cilia and flagella associated protein 43.
   
 
 0.923
ENSVPAP00000003396
annotation not available
   
   0.921
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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