STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCUBE2Signal peptide, CUB domain and EGF like domain containing 2. (930 aa)    
Predicted Functional Partners:
ARID4B
AT-rich interaction domain 4B.
    
 0.857
HHAT
Hedgehog acyltransferase.
    
 
 0.771
CDON
Cell adhesion associated, oncogene regulated.
    
 0.769
ADAMTS18
ADAM metallopeptidase with thrombospondin type 1 motif 18.
   
 0.715
ENSVPAP00000001913
annotation not available
   
 0.715
SMO
Smoothened, frizzled class receptor.
    
 
 0.705
DHH
Desert hedgehog signaling molecule.
    
 0.701
HIVEP2
HIVEP zinc finger 2.
    
 0.677
USH2A
Usherin.
    
 0.673
KIF1B
Kinesin family member 1B.
    
 
 0.673
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.