ENSVPAP00000003640 protein (Vicugna pacos) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Gene Fusion

Co-occurrence

Co-expression

Experiments

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[Homology]

Score

ENSVPAP00000003640

annotation not available (219 aa)

Predicted Functional Partners:

HSPA12A

0.891

ENSVPAP00000007090

0.837

ENSVPAP00000008066

0.755

ITSN2

0.736

ENSVPAP00000007562

0.735

AMPH

0.735

ITSN1

0.720

ENSVPAP00000010613

0.710

ENSVPAP00000006432

0.697

ENSVPAP00000000288

0.688

Your Current Organism:

Vicugna pacos

NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMPH	ENSVPAP00000003640	ENSVPAP00000010473	ENSVPAP00000003640	Amphiphysin.	annotation not available	0.735
AMPH	ENSVPAP00000006432	ENSVPAP00000010473	ENSVPAP00000006432	Amphiphysin.	annotation not available	0.480
AMPH	ENSVPAP00000007562	ENSVPAP00000010473	ENSVPAP00000007562	Amphiphysin.	annotation not available	0.973
AMPH	HSPA12A	ENSVPAP00000010473	ENSVPAP00000005129	Amphiphysin.	Heat shock protein family A (Hsp70) member 12A.	0.655
AMPH	ITSN1	ENSVPAP00000010473	ENSVPAP00000008520	Amphiphysin.	Intersectin 1.	0.658
AMPH	ITSN2	ENSVPAP00000010473	ENSVPAP00000005159	Amphiphysin.	Intersectin 2.	0.765
ENSVPAP00000000288	ENSVPAP00000003640	ENSVPAP00000000288	ENSVPAP00000003640	annotation not available	annotation not available	0.688
ENSVPAP00000000288	ENSVPAP00000006432	ENSVPAP00000000288	ENSVPAP00000006432	annotation not available	annotation not available	0.623
ENSVPAP00000000288	ENSVPAP00000007090	ENSVPAP00000000288	ENSVPAP00000007090	annotation not available	annotation not available	0.507
ENSVPAP00000000288	ENSVPAP00000008066	ENSVPAP00000000288	ENSVPAP00000008066	annotation not available	annotation not available	0.592
ENSVPAP00000000288	ENSVPAP00000010613	ENSVPAP00000000288	ENSVPAP00000010613	annotation not available	annotation not available	0.821
ENSVPAP00000000288	HSPA12A	ENSVPAP00000000288	ENSVPAP00000005129	annotation not available	Heat shock protein family A (Hsp70) member 12A.	0.415
ENSVPAP00000000288	ITSN1	ENSVPAP00000000288	ENSVPAP00000008520	annotation not available	Intersectin 1.	0.908
ENSVPAP00000000288	ITSN2	ENSVPAP00000000288	ENSVPAP00000005159	annotation not available	Intersectin 2.	0.977
ENSVPAP00000003640	AMPH	ENSVPAP00000003640	ENSVPAP00000010473	annotation not available	Amphiphysin.	0.735
ENSVPAP00000003640	ENSVPAP00000000288	ENSVPAP00000003640	ENSVPAP00000000288	annotation not available	annotation not available	0.688
ENSVPAP00000003640	ENSVPAP00000006432	ENSVPAP00000003640	ENSVPAP00000006432	annotation not available	annotation not available	0.697
ENSVPAP00000003640	ENSVPAP00000007090	ENSVPAP00000003640	ENSVPAP00000007090	annotation not available	annotation not available	0.837
ENSVPAP00000003640	ENSVPAP00000007562	ENSVPAP00000003640	ENSVPAP00000007562	annotation not available	annotation not available	0.735
ENSVPAP00000003640	ENSVPAP00000008066	ENSVPAP00000003640	ENSVPAP00000008066	annotation not available	annotation not available	0.755